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Fig. 2 | BMC Systems Biology

Fig. 2

From: Subtype-specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines

Fig. 2

a Bar plots demonstrate the number of differentially methylated bins for each pair-wise tumor type comparisons. Significance of each bin methylation on each genomic region between two subtypes are tested by t-test and adjusted with Bonferroni correction (P.adj-value < 0.05). b Ratio of hypo methylation in intron and CpGI shore regions. Each color represents hypo methylation ratio of certain tumor subtype among differentially methylated bins. Hypo methylation ratio of other regions are in Supplementary Figure S1 (see Additional file 1)

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