Interspecies gene function prediction using semantic similarity

BMC Systems Biology

Table 1 Statistics of GO annotations of genes from four species

Species	♯genes	CC			MF			BP
		history	recent	♯terms	history	recent	♯terms	history	recent	♯terms
Human	19158	231057	298776	1160	115066	153722	1999	745989	920663	8696
Mouse	21357	164539	291488	1193	95511	158471	2033	622591	933356	9304
Danio rerio	18776	27434	77539	627	24652	59710	1174	172557	301163	4382
Arabidopsis thaliana	24532	114777	150144	528	42720	64737	1189	197277	281562	3305

♯genes is the number of genes in the recent GOA file (archived date: 2016-01-04), ♯terms is the number of involved terms. ‘history’ is the number of GO annotations of genes from historical GOA file (archived date: 2014-01-20), ‘recent’ is the number of GO annotations of genes from recent GOA files

ISSN: 1752-0509