Fig. 2

Analysis results of the STKE network by MORO. a A summary table. Modularity and robustness results in module and network levels are listed in the upper and the lower tables, respectively. b Result of the detailed visualization mode. We found a total of 16 modules each of which is represented by a circular list of genes. c-d Results of the brief visualization mode with absolute and relative relations, respectively. Each module is represented by a single group node whose radius is proportional to the number of nodes belonging to the module. The weight of a link denotes the number of interactions between the corresponding pair of modules and the ratio of the number of interactions between a pair of modules to the maximal possible number of interactions between them in (c) and (d), respectively. e-f The reduced visualization results. They are subnetworks induced from (c) and (d), respectively, by removing all links except about 30% of links with the highest weight values (This is performed by specifying the appearance ratio parameter in MORO)