Integrated single cell data analysis reveals cell specific networks and novel coactivation markers

BMC Systems Biology

Table 1 Description of nine murine neuronal single-cell RNA-Seq datasets. DRG - dorsal root ganglion

Author	GEO/SRA Accession	Number of Cells	Cell Type(s)	Read Length	Median Read Depth
Fuzik et al. [37]	GSE70844	83	Excitatory pyramidal and inhibitory neurons	51	391,449
Hanchate et al. [25]	GSE75413	93	Olfactory sensory neurons	98	3,352,691
Li et al. [23]	GSE63576	209	Somatosensory DRG neurons	200	18,300,045
Lovatt et al. [24]	GSE52525	28	Mixed cultures of dispersed braincells, hippocampal pyramidal neurons	202	17,727,180
Saraiva et al. [15]	PRJEB4014, PRJEB8101, PRJEB4461	264	Olfactory sensory neurons	200	1,570,234
Tan et al. [4]	SRP065920	143	Olfactory sensory neurons	100	936,016
Tasic et al. [38]	GSE71585	1,809	Cortical cells	89	2,350,114
Usoskin et al. [39]	GSE59739	864	Lumbar DRG neurons	40	86,588
Zeisel et al. [40]	GSE60361	3,005	Somatosensory and hippocampal C1 neurons	52	496,431
Total		6498

ISSN: 1752-0509