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Table 6 Constraints for each cell type in model simulations for FBA and FVA

From: The use of genome-scale metabolic network reconstruction to predict fluxes and equilibrium composition of N-fixing versus C-fixing cells in a diazotrophic cyanobacterium, Trichodesmium erythraeum

Parameter

Diazotroph

Photoautotroph

Carbon Uptake (mmol C (g DW)-1 h-1)

0.927 (glycogen) [29]

0.927 (CO2) [29]

Nitrogen Uptake (mmol N (g DW)-1 h-1)

Unlimited (N2)

Unlimited (NH4 +)

Nitrogenase Flux (mmol (g DW)-1 h-1)

0.132

0

Maintenance Energy (mmol ATP (g DW)-1 h-1)

64.3

67.2

hν PSI

80

80 − hν PSII

hν PSII

0

80 − hν PSI

Growth Rate (h-1)

0.0146 [29]

0.0146 [29]

Metabolite Output

NH4 +

Glycogen

Objective Function

Maximize biomass

Maximize biomass