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Fig. 4 | BMC Systems Biology

Fig. 4

From: A new efficient approach to fit stochastic models on the basis of high-throughput experimental data using a model of IRF7 gene expression as case study

Fig. 4

IRF7 gene expression circuit. a In viral infected cells IRF7 gene expression is induced after IFN stimulation by the JAK-STAT signaling pathway. The IRF7 promoter activation is governed by the binding of IRF7 dimer and ISGF3 to the promoter DNA binding sites (ISRE and IRFE). IRF7 promoter activation leads to the transcription of IRF7 mRNA and subsequent its translation to produce the IRF7 protein. Notice that the IRF7 production and subsequently phosphorylation and dimerization leads to the binding to its own DNA binding site, resulting in the production of more IRF7, making in this way a positive feedback loop. b A simplified system representing the IRF7 gene expression dynamics is given. Here, the promoter transitions between active/basal states (Pa/Po), the gene transcription and translation processes are represented as solid black lines as well as the feedback loop in the system

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