An additional k-means clustering step improves the biological features of WGCNA gene co-expression networks

BMC Systems Biology

Table 1 Real names for the tissues used in the UKBEC and GTEx brain tissue experiments

Short name	UKBEC Tissue name	Samples	Short name	GTEx Tissue name	Samples
CRBL	Cerebellum	76	AMYG	Amygdala	72
FCTX	Frontal Cortex	83	ACCT	Anterior cingulate cortex (BA24)	84
HIPP	Hippocampus	86	CAUD	Caudate (basal ganglia)	117
MEDU	Medulla	88	CEHE	Cerebellar Hemisphere	105
OCTX	Occipital cortex	77	CERE	Cerebellum	125
PUTM	Putamen	77	CTEX	Cortex	114
SNIG	Substantia nigra	65	FCTX	Frontal Cortex (BA9)	108
TCTX	Temporal Cortex	72	HIPP	Hippocampus	94
THAL	Thalamus	81	HYPO	Hyppothalamus	96
WHMT	White matter	83	NUAC	Nucleus accumbens (basal ganglia)	113
			PUTM	Putamen	97
			SPIN	Spinal Cord	71
			SNIG	Substantianigra	63

ISSN: 1752-0509