Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production

Table 2 Metabolic reconstructions of algæ. List of metabolic reconstructions for algæ species

ID	Species	Genome-	Detailed glycero-	Multi-	Availability	in BiGG	Reference
		scale	lipid metabolism	compartment		database
-	C. protothecoides	No	No	Yes	SBML	No	[31]
iCS843	C. vulgaris	Yes	Yes	Yes	SBML	No	[29]
iAJ526	C. variabilis	Yes	No	Yes	SBML	No	[30]
-	C. pyrenoidosa	No	No	No	No mathematical model	No	[33]
-	C. sp FC2 IITG	No	No	No	not available	No	[32]
EctoGEM	E. siliculosus	Yes	No	Yes	SBML	No	[42]
iEH410	E. huxleyi	Yes	No	Yes	SBML, MAT	No	[43]
-	C. reinhardtii	Yes	No	No	not available	No	[26]
iRC1080	C. reinhardtii	Yes	Yes	Yes	SBML, MAT	Yes	[22]
ChlamyCyc	C. reinhardtii	Yes	No	No	online	No	[27]
-	C. reinhardtii	No	No	Yes	XLS	No	[25]
-	C. reinhardtii	No	No	Yes	not available	No	[24]
iBD1106	C. reinhardtii	Yes	Yes	Yes	SBML	No	[21]
iCre1355	C. reinhardtii	Yes	Yes	Yes	SBML	No	[20]
AlgaGEM	C. reinhardtii	Yes	No	Yes	SBML	No	[23]
iLB1027	P. tricornutum	Yes	Yes	Yes	SBML	No	[35]
-	P. tricornutum	No	No	Yes	No mathematical model	No	[39]
DiatomCyc	P. tricornutum	Yes	No	No	Online	No	[40]
-	P. tricornutum	No	No	Yes	SBML	No	[41]
-	P. tricornutum	Yes	No	Yes	SBML	No	[38]
-	P. tricornutum	No	No	No	not available	No	[36]
-	P. tricornutum	No	Yes	No	No mathematical model	No	[37]
-	O. lucimarinus	Yes	No	No	SBML	No	[34]
-	O. tauri	Yes	No	No	SBML	No	[34]
-	B. braunii	No	No	No	No mathematical model	No	[28]

ISSN: 1752-0509