From: Mimvec: a deep learning approach for analyzing the human phenome
 | TOP (%) | MRR (%) | AUC (%) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RSEQ | PSEQ | STRG | GOBP | RSEQ | PSEQ | STRG | GOBP | RSEQ | PSEQ | STRG | GOBP | ||
Linkage Interval | Mimvec (50) | 31.09 | 34.57 | 42.37 | 40.47 | 19.64 | 21.37 | 12.89 | 11.84 | 80.66 | 78.91 | 87.47 | 88.54 |
Mimvec (100) | 32.33 | 35.88 | 43.54 | 41.69 | 19.62 | 21.22 | 12.72 | 11.97 | 80.67 | 79.07 | 87.65 | 88.41 | |
Mimvec (150) | 32.09 | 35.52 | 43.22 | 41.08 | 19.95 | 21.46 | 12.91 | 12.31 | 80.34 | 78.82 | 87.45 | 88.06 | |
Mimvec (200) | 32.33 | 35.97 | 43.15 | 41.56 | 20.10 | 21.59 | 13.06 | 12.43 | 80.19 | 78.69 | 78.30 | 87.94 | |
Mimvec (250) | 31.53 | 35.29 | 42.93 | 41.11 | 20.29 | 21.62 | 12.98 | 12.45 | 80.00 | 78.67 | 87.39 | 87.92 | |
Mimvec (300) | 32.05 | 35.38 | 43.20 | 41.13 | 20.22 | 21.83 | 13.05 | 12.61 | 80.07 | 78.45 | 87.31 | 87.76 | |
Nearest Neighbor | Mimvec (50) | 38.36 | 42.39 | 52.21 | 49.88 | 19.19 | 21.05 | 12.56 | 11.43 | 81.13 | 79.30 | 87.84 | 88.96 |
Mimvec (100) | 40.37 | 44.11 | 54.19 | 51.19 | 19.19 | 20.89 | 12.38 | 11.59 | 81.13 | 79.46 | 88.02 | 88.81 | |
Mimvec (150) | 40.50 | 44.22 | 54.15 | 51.32 | 19.50 | 21.13 | 12.53 | 11.88 | 80.81 | 79.22 | 87.86 | 88.51 | |
Mimvec (200) | 40.74 | 44.35 | 53.69 | 51.36 | 19.68 | 21.25 | 12.69 | 12.06 | 80.63 | 79.10 | 87.70 | 88.33 | |
Mimvec (250) | 39.47 | 43.81 | 53.52 | 50.95 | 19.84 | 21.27 | 12.61 | 12.04 | 80.47 | 79.08 | 87.79 | 88.84 | |
Mimvec (300) | 40.21 | 43.97 | 53.78 | 50.84 | 19.78 | 21.47 | 12.66 | 12.21 | 80.52 | 79.28 | 87.74 | 88.18 | |
Random Control | Mimvec (50) | 42.72 | 48.01 | 58.61 | 54.78 | 17.83 | 20.43 | 11.87 | 10.68 | 82.50 | 79.91 | 88.53 | 89.73 |
Mimvec (100) | 44.33 | 50.36 | 59.87 | 57.04 | 17.72 | 20.34 | 11.66 | 10.83 | 82.60 | 80.01 | 88.74 | 89.57 | |
Mimvec (150) | 44.46 | 49.50 | 59.81 | 56.50 | 18.08 | 20.59 | 11.86 | 11.08 | 82.24 | 79.76 | 88.54 | 89.32 | |
Mimvec (200) | 44.68 | 49.40 | 59.50 | 55.93 | 18.34 | 20.71 | 11.98 | 11.26 | 81.99 | 79.64 | 88.43 | 89.64 | |
Mimvec (250) | 43.94 | 49.25 | 59.18 | 55.91 | 18.48 | 20.71 | 11.95 | 11.22 | 81.84 | 79.64 | 88.45 | 89.68 | |
Mimvec (300) | 44.11 | 48.88 | 59.02 | 55.76 | 18.37 | 20.95 | 11.97 | 11.43 | 81.95 | 79.39 | 88.44 | 88.96 |