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Table 4 The performance comparison on the Combined data set in terms of normalized AUC values

From: A two-step framework for inferring direct protein-protein interaction network from AP-MS data

  BGS PCA Y2H
  Initial Filtered(ND) Filtered(Silencer) Initial Filtered(ND) Filtered(Silencer) Initial Filtered(ND) Filtered(Silencer)
SA 0.81 0.80 0.79 0.76 0.73 0.73 0.76 0.77 0.78
PE 0.63 0.77 0.76 0.59 0.74 0.72 0.55 0.77 0.73
DC 0.54 0.67 0.68 0.57 0.67 0.65 0.44 0.71 0.70
Hart 0.72 0.77 0.78 0.70 0.75 0.75 0.65 0.74 0.75
  1. In the table, the symbol highlights the case that the normalized AUC value is increased in the curve derived from the filtered network. If there is no improvement, then is used instead