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Table 7 Sequences with different lengths

From: Hybrid method to solve HP model on 3D lattice and to probe protein stability upon amino acid mutations

Sequence ID Amino acids sequence Length H-H IBE number
B H 4 P 2 H 7 P 3 H 17 9 2
C HPHP 2 H 2 PHP 2 HPH 2 P 2 HPH 20 11 11
D P 2 HP 2 H 2 P 4 H 2 P 4 H 2 P 4 H 2 25 9 139
E P 3 H 2 P 2 H 2 P 5 H 7 P 2 H 2 P 4 H(HP 2)2 36 17 432
F P 2 H(P 2 H 2)2 P 5 H 10 P 6(H 2 P 2)2 HP 2 H 5 48 29 976
  1. H-H interactions were the same by TPPSO1 and TPPSO2. IBE numbers were computed by TPPSO2. These sequences were simulated by different methods, and every method only folds a part of sequences. TPPSO2 found the minimal free energy of all sequences