Fig. 7From: Identification of regulatory modules in genome scale transcription regulatory networksHeat map for co-expression levels of CoReg-identified modules in DAP-Seq network. We first ran CoReg on the DAP-seq network to identify the modules. Then for each co-regulatory module, we calculated the pairwise co-expression values for all the genes in the module and averaged the pairwise co-expression to get a single co-expression value for the module. We selected 108 modules which are significantly co-expressed (p-value <0.05) in at least 20 out of 62 experiments (See estimate p-value in large-scale network in Methods section) to plot the heat map for co-expression. The conditions for each experiment are marked in the top panel with black squares. The module type is marked on the left panel with black squareBack to article page