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Table 2 Top 10 gene combinations in the result

From: GxGrare: gene-gene interaction analysis method for rare variants from high-throughput sequencing data

Rank

Gene combination

WCVC

BA train

BA test

*p-value

1

ATP9A, DNAH17

9.924

0.572

0.572

5.00E-06

2

DNAH17, KARS

9.899

0.571

0.571

8.00E-06

3

CHD5, PALB2

9.893

0.571

0.570

1.00E-06

4

DNAH17, EPHB1

9.861

0.569

0.569

1.10E-05

5

ARHGEF16, CHD5

9.855

0.568

0.568

1.00E-06

6

DNAH17, TRPM8

9.848

0.568

0.568

1.70E-06

7

DNAH17, PTPRH,

9.844

0.568

0.568

1.40E-05

8

CARD10, CHD5

9.834

0.567

0.567

5.00E-06

9

CHD5, FAM149A

9.820

0.566

0.566

2.00E-06

10

CHD5, TRANK1

9.814

0.566

0.566

5.00E-06

  1. *p-value is calculated by 1,000,000 permutations