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Table 5 Exploring the dendrogram cut level for modified Walktrap with a maximum cluster size of 100

From: RETRACTED ARTICLE: Detangling PPI networks to uncover functionally meaningful clusters

Dendrogram cut level 200 300 500 700
PPI 55.3% 53.6% 54.9% 55.3%
DSD 4.5 30.7% 30.7% 30.7% 30.3%
DSD 5 44.1% 44.0% 44.1% 44.2%
DSD 5.5 66.7% 66.9% 65.1% 65.3%
DSD 6 72.6% 68.3% 66.2% 63.0%
DSD 6.5 65.5% 68.4% 61.8% 53.7%
  1. The reported number is the percentage of nodes placed into an enriched cluster (i.e. the statistic we are calling % NEC). At different dendrogram cut levels, the best percentage is bolded; in every case it is modified Walktrap plus DSD, at varying thresholds (5.5, 6, and 6.5)