Detecting complexes from edge-weighted PPI networks via genes expression analysis

BMC Systems Biology

Table 3 Validity of our filtering threshold parameters (max,min) of Den(C,2)

Den(C,2)	\|complex\|	N _cp	N _cb	S _n	PPV	Acc	Precision	Recall	F-Measure
(0.14,0)	1409	736	214	0.5750	0.4956	0.5338	0.5224	0.5245	0.5234
(0.16,0)	1409	735	213	0.5734	0.4959	0.5333	0.5216	0.5221	0.5218
(0.18,0)	1409	741	218	0.5714	0.4959	0.5323	0.5259	0.5343	0.5301
(0.20,0)	1409	741	217	0.5708	0.4964	0.5323	0.5259	0.5319	0.5289
(0.22,0)	1409	738	217	0.5698	0.4962	0.5317	0.5238	0.5319	0.5278
(0.24,0)	1409	738	217	0.5698	0.4961	0.5317	0.5238	0.5319	0.5278
(0.26,0)	1409	734	217	0.5693	0.4963	0.5315	0.5209	0.5319	0.5263
(0.18,0.04)	1152	678	208	0.5406	0.5203	0.5304	0.5885	0.5098	0.5464
(0.18,0.05)	1128	663	207	0.5349	0.5251	0.5300	0.5878	0.5074	0.5446
(0.18,0.06)	1094	649	207	0.5328	0.5288	0.5308	0.5932	0.5074	0.5469
(0.18,0.07)	1079	640	205	0.5281	0.5308	0.5295	0.5931	0.5025	0.5440
(0.18,0.08)	1059	630	205	0.5250	0.5347	0.5298	0.5949	0.5025	0.5448
(0.18,0.09)	1034	613	204	0.5182	0.5371	0.5276	0.5928	0.5000	0.5425
(0.18,0.10)	1027	606	202	0.5099	0.5400	0.5247	0.5901	0.4951	0.5384
All	1563	756	213	0.5812	0.4871	0.5321	0.4836	0.5221	0.5021

ISSN: 1752-0509