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Table 4 WD40 proteins in different layers by k-core decomposition on HC-PPI network

From: PPI network analyses of human WD40 protein family systematically reveal their tendency to assemble complexes and facilitate the complex predictions

k-layer # of WD40 # of non-WD40 WD40 protein
21 0 26
20 0 203
19 3 141 MED16, GBLP, COR1C
18 8 130 FBW1A, FBXW7, ARC1B, FBW1B, RBBP4, DDB1, PAAF1, RBBP7
17 11 253 EED, VPRBP, STRN3, WDR5, MEP50, CDC20, STRN, DDB2, WDR1, BUB3, 2ABB
16 12 262 WDR48, WRP73, RFWD2, EIF3B, SEH1, RBBP5, STRN4, PRP19, EIF3I, DCAF7, RAE1L, PRP4
15 10 216 TBL1X, SEC13, GEMI5, NEDD1, SNR40, COPA, FZR, STRAP, COR1B, 2ABD
14 6 216 TBL1R, TLE1, KI21A, TAF5, WDR62, FAN
13 8 277 2ABA, KI21B, TF3C2, 2ABG, LRWD1, LYST, WDR33, WAP53
12 6 281 RPTOR, CAF1B, GBB2, GBB1, WDR82, COR2A
11 7 376 EDC4, WDR61, FBXW5, COPB2, A16L1, WDR20, WDR36
10 13 312 CIR1A, CORO7, APAF, DCA11, PAN2, PLRG1, FBXW4, DTL, TBL3, WDR18, WDR26, PHIP, THOC6
9 12 448 WIPI2, LIS1, NUP37, HPS5, PALB2, WDR90, ERCC8, WDR92, DCAF8, WDR6, NUP43, TAF5L
8 12 426 PI3R4, GBB4, TLE3, WDR83, ELP2, CIAO1, THOC3, WDR35, WDR74, FBXW8, ARC1A, CSTF1
7 7 463 LST8, DC1I2, DCAF4, WDR75, NBEL1, WDR76, HIRA
6 3 551 SMU1, WDR3, DC1I1
5 15 682 SHKB1, DCA10, KCTD3, BRWD1, GBB5, GBB3, AAAS, PWP2, WDHD1, EMAL3, UTP18, PEX7, BOP1, SC31A, WDR24
4 14 802 NBEL2, WDR34, EIF2A, WDR44, STXB5, PRP17, WDTC1, PLAP, TLE2, WDR43, WSB1, FBXW2, UTP15, AHI1
3 17 1078 NLE1, WDR12, TSSC1, WIPI1, DCA13, POC1B, COR1A, IF172, SCAP, AAMP, EMAL4, WDR70, BRWD3, DCAF5, TRAF7, WDR5B, WDR46
2 20 1449 DCA12, FBXW9, WIPI4, EMAL1, LRBA, DMXL2, TEP1, WSB2, EMAL2, WDR59, WDR55, DMXL1, WDR7, PK1IP, PWP1, HERC1, WDR4, TBL2, MIO, U3IP2
1 19 2313 TCPR2, COR2B, WDR47, WDR37, GNB1L, DC121, IFT80, IF122, TBL1Y, SC31B, DC4 L1, MABP1, NOL10, EMAL5, KTNB1, DEND3, WDR81, NBEA, WDR25