Table 1 Conserved motifs of σ70 promoter samples identified by the MEME system
From: 70ProPred: a predictor for discovering sigma70 promoters based on combining multiple features
Motif | Width | Best possible match | Sites count |
|---|---|---|---|
1 | 50 | YTKRMMWNNBNRGNVGVAMTSCGTATWATGCGCCYCCNYBVMCVCGKRVV | 47 |
2 | 21 | ATBGTTATCRATHWHATTDKC | 20 |
3 | 38 | KKATATTGMHGTTRRWATDAWTAGTMTWAATGCSGCTT | 10 |