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Table 1 Overview of the sequencing and mapping of transcriptome data of different rice tissues

From: Transcriptomic and metabolic flux analyses reveal shift of metabolic patterns during rice grain development

Stage Tissue RawData(bp) RawData (number) CleanData (number) Mapped reads(number) Mapping rate
Booting stage leaves 4,392,290,250 35,138,322 26,531,310 24,899,774 93.9%
sheath 5,873,023,000 46,984,184 36,659,446 34,301,867 93.6%
stamen 6,059,084,500 48,472,676 38,746,796 36,425,576 94.0%
pistil 4,348,780,750 34,790,246 26,154,367 24,861,601 95.1%
lemma & palea 4,673,388,000 37,387,104 30,018,313 28,174,883 93.9%
Mature grain stage embryo 4,524,559,250 36,196,474 30,212,929 27,930,200 92.4%
endosperm 4,892,736,750 39,141,894 27,017,181 25,101,827 92.9%
lemma & palea 5,028,140,000 40,225,120 29,610,747 27,684,908 93.5%