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Table 2 Comparison of growth predictions and in vivo tests on 22 carbon sources

From: Reconstruction of a genome-scale metabolic model for Actinobacillus succinogenes 130Z

   In vivo
   Growth No growth
In silico Growth TP = 19 (86%) FP = 0 (0%)
No growth FN = 2 (9%) TN = 1 (5%)
  1. True Positives (TP) and True Negatives (TN) indicate the number of carbon sources in which growth phenotypes were correctly predicted, while False Positives (FP) and False Negatives (FN) indicate the number carbon sources in which in silico predictions did not match in vivo observations