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Fig. 6 | BMC Systems Biology

Fig. 6

From: Cellular network modeling and single cell gene expression analysis reveals novel hepatic stellate cell phenotypes controlling liver regeneration dynamics

Fig. 6

Heatmap representation of gene expression values for individual HSCs. Cells are grouped based on functional state. Genes are grouped by hierarchical clustering based on Pearson correlation. Gene annotations are colored based on functional annotations. Genes discussed in the text have their names offset for ease of identifying them. Green = growth factors, gray = collagen-related genes, orange = Tgfb signaling, blue = matrix-modulating genes. We also show overrepresented functions (GO Terms) for each gene group identified in our single cell data compared to the background of all genes measured. * Indicates p-value < 0.05

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BMC Systems Biology

ISSN: 1752-0509

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