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Table 2 Experimental platforms used in the tests

From: SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences

  Platform
  FPGA GPU Xeon Phi
Host 2 ×Intel Xeon E5-2670 2.60Ghz 2 ×Intel Xeon E5-2695 v3 2.30Ghz 2 ×Intel Xeon E5-2695 v3 2.30Ghz
  (16 cores, 32GB RAM) (28 cores, 64 GB RAM) (28 cores, 128 GB RAM)
Accelerator Intel Arria 10 GX NVIDIA GTX 980 Intel Xeon Phi 3120P
   (Maxwell architecture, 2048 CUDA cores, 4GB RAM)  
  (2GB RAM) NVIDIA GTX1080 (Knights corner generation, 57 cores, 6GB RAM)
   (Pascal architecture, 2560 CUDA cores, 8GB RAM)  
Operating system CentOS release 6.5 Debian release 8.0 CentOS release 6.5
Compiler Intel ICC 17.0.1.132 Intel ICC 17.0.1.132 Intel ICC 17.0.1.132
  Intel FPGA OpenCL SDK 16.0 CUDA SDK 7.5