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Table 1 Regulatory modules generated by ModuleDiscoverer

From: Module-detection approaches for the integration of multilevel omics data highlight the comprehensive response of Aspergillus fumigatus to caspofungin

Underlying experimental dataset

Number of nodes (components)

Number of edges (interactions)

Transcriptome 0.5 h

511

2967

Transcriptome 1 h

256

1336

Transcriptome 4 h

313

1604

Transcriptome 8 h

256

1208

Proteome 4 h

147

845

Proteome 8 h

124

520

Secretome 8 h

293

2413

Overall regulatory module

894

6111

  1. Number of nodes (representing gene or protein components) and edges (representing interactions between the components) of the regulatory modules received by ModuleDiscoverer