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Table 4 Transcription factors within the overall regulatory module

From: Module-detection approaches for the integration of multilevel omics data highlight the comprehensive response of Aspergillus fumigatus to caspofungin

CADRE-IDs AspGD-IDs Protein names log2FC
T 0.5 h T 1 h T 4 h T 8 h P 4 h P 8 h S 8 h
CADAFUBP00000978 AFUB_009970 CBF/NF-Y family transcription factor, putative 0.230 0.447 −0.124 0.002 −0.034 −0.150 NA
CADAFUBP00001789 AFUB_018340 HLH transcription factor, putative −1.441 −0.236 0.128 −0.355 NA NA NA
CADAFUBP00003751 AFUB_038290 Zinc knuckle transcription factor/splicing factor MSL5/ZFM1, putative 0.366 0.062 0.111 0.143 −0.368 −0.322 3.379
CADAFUBP00004232 AFUB_043140 Transcription elongation factor SPT6, putative −0.369 −0.235 − 0.177 −0.563 0.143 0.188 NA
CADAFUBP00005084 AFUB_051950 PHD transcription factor (Rum1), putative −1.069 0.036 0.089 −0.780 −0.071 − 0.042 NA
CADAFUBP00007653 AFUB_078520 Stress response regulator/HFS transcription factor, putative 0.317 −0.271 0.034 −0.102 −0.130 0.072 NA
CADAFUBP00001318 AFUB_013400 TFIIH complex helicase Rad3, putative 0.154 0.034 −0.055 − 0.226 −0.032 0.222 NA
CADAFUBP00003811 AFUB_038920 Ccr4-Not transcription complex subunit (NOT1), putative −0.786 −0.076 0.038 −0.834 − 0.100 −0.041 NA
  1. Transcription factors detected in the overall regulatory module and their log2 Fold Change (log2FC) measured for the transcriptomic (T), proteomic (P) and secretomic (S) fungal response to caspofungin at all time points, respectively