TY - STD TI - Center for Behavioral Health Statistics and Quality. Key substance use and mental health indicators in the United States: results from the 2015 National Survey on Drug Use and Health (HHS Publication No. SMA 16-4984, NSDUH Series H-51). 2016. Retrieved from https://www.samhsa.gov/data/sites/default/files/NSDUH-FFR1-2015/NSDUH-FFR1-2015/NSDUH-FFR1-2015.pdf. UR - https://www.samhsa.gov/data/sites/default/files/NSDUH-FFR1-2015/NSDUH-FFR1-2015/NSDUH-FFR1-2015.pdf ID - ref1 ER - TY - JOUR AU - Degenhardt, L. AU - Hall, W. PY - 2012 DA - 2012// TI - Extent of illicit drug use and dependence, and their contribution to the global burden of disease JO - The Lancet VL - 379 UR - https://doi.org/10.1016/S0140-6736(11)61138-0 DO - 10.1016/S0140-6736(11)61138-0 ID - Degenhardt2012 ER - TY - JOUR AU - Wang, H. AU - Naghavi, M. AU - Allen, C. AU - Barber, R. M. AU - Bhutta, Z. A. AU - Carter, A. AU - Casey, D. C. AU - Charlson, F. J. AU - Chen, A. Z. AU - Coates, M. M. PY - 2016 DA - 2016// TI - Global, regional, and national life expectancy, all-cause mortality, and cause-specific mortality for 249 causes of death, 1980–2015: a systematic analysis for the global burden of disease study 2015 JO - The lancet VL - 388 UR - https://doi.org/10.1016/S0140-6736(16)31012-1 DO - 10.1016/S0140-6736(16)31012-1 ID - Wang2016 ER - TY - JOUR AU - Kassebaum, N. J. AU - Arora, M. AU - Barber, R. M. AU - Bhutta, Z. A. AU - Brown, J. AU - Carter, A. AU - Casey, D. C. AU - Charlson, F. J. AU - Coates, M. M. AU - Coggeshall, M. PY - 2016 DA - 2016// TI - Global, regional, and national disability-adjusted life-years (dalys) for 315 diseases and injuries and healthy life expectancy (hale), 1990–2015: a systematic analysis for the global burden of disease study 2015 JO - The Lancet VL - 388 UR - https://doi.org/10.1016/S0140-6736(16)31460-X DO - 10.1016/S0140-6736(16)31460-X ID - Kassebaum2016 ER - TY - JOUR AU - Jensen, K. P. PY - 2016 DA - 2016// TI - A review of genome-wide association studies of stimulant and opioid use disorders JO - Mol Neuropsychiatry VL - 2 UR - https://doi.org/10.1159/000444755 DO - 10.1159/000444755 ID - Jensen2016 ER - TY - JOUR AU - Wray, N. R. AU - Lee, S. H. AU - Mehta, D. AU - Vinkhuyzen, A. A. E. AU - Dudbridge, F. AU - Middeldorp, C. M. PY - 2014 DA - 2014// TI - Research Review: Polygenic methods and their application to psychiatric traits JO - J Child Psychol Psychiatry Allied Discip VL - 55 UR - https://doi.org/10.1111/jcpp.12295 DO - 10.1111/jcpp.12295 ID - Wray2014 ER - TY - JOUR AU - Loh, P. -. R. AU - Kichaev, G. AU - Gazal, S. AU - Schoech, A. P. AU - Price, A. L. PY - 2018 DA - 2018// TI - Mixed-model association for biobank-scale datasets JO - Nat Genet VL - 50 UR - https://doi.org/10.1038/s41588-018-0144-6 DO - 10.1038/s41588-018-0144-6 ID - Loh2018 ER - TY - JOUR AU - Gelernter, J. AU - Kranzler, H. R. AU - Sherva, R. AU - Koesterer, R. AU - Almasy, L. AU - Zhao, H. AU - Farrer, L. PY - 2014 DA - 2014// TI - Genome-wide association study of opioid dependence: Multiple associations mapped to calcium and potassium pathways JO - Biol Psychiatry VL - 76 UR - https://doi.org/10.1016/j.biopsych.2013.08.034 DO - 10.1016/j.biopsych.2013.08.034 ID - Gelernter2014 ER - TY - JOUR AU - Gelernter, J. AU - Sherva, R. AU - Koesterer, R. AU - Almasy, L. AU - Zhao, H. AU - Kranzler, H. R. AU - Farrer, L. PY - 2014 DA - 2014// TI - Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene JO - Mol Psychiatry VL - 19 UR - https://doi.org/10.1038/mp.2013.99 DO - 10.1038/mp.2013.99 ID - Gelernter2014 ER - TY - JOUR AU - Goldman, D. AU - Oroszi, G. AU - Ducci, F. PY - 2005 DA - 2005// TI - The genetics of addictions: uncovering the genes JO - Nat Rev Genet VL - 6 UR - https://doi.org/10.1038/nrg1635 DO - 10.1038/nrg1635 ID - Goldman2005 ER - TY - BOOK AU - Ball, J. C. AU - Ross, A. PY - 2012 DA - 2012// TI - The Effectiveness of Methadone Maintenance Treatment: Patients, Programs, Services, and Outcome PB - Springer CY - New York ID - Ball2012 ER - TY - JOUR AU - Cai, J. -. F. AU - Candès, E. J. AU - Shen, Z. PY - 2010 DA - 2010// TI - A singular value thresholding algorithm for matrix completion JO - SIAM J Optim VL - 20 UR - https://doi.org/10.1137/080738970 DO - 10.1137/080738970 ID - Cai2010 ER - TY - JOUR AU - Keshavan, R. H. AU - Montanari, A. AU - Oh, S. PY - 2010 DA - 2010// TI - Matrix completion from a few entries JO - Inf Theory IEEE Trans VL - 56 UR - https://doi.org/10.1109/TIT.2010.2046205 DO - 10.1109/TIT.2010.2046205 ID - Keshavan2010 ER - TY - CHAP AU - Menon, A. K. AU - Chitrapura, K. -. P. AU - Garg, S. AU - Agarwal, D. AU - Kota, N. PY - 2011 DA - 2011// TI - Response prediction using collaborative filtering with hierarchies and side-information BT - Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining PB - ACM CY - New York City ID - Menon2011 ER - TY - JOUR AU - Natarajan, N. AU - Dhillon, I. S. PY - 2014 DA - 2014// TI - Inductive matrix completion for predicting gene–disease associations JO - Bioinformatics VL - 30 UR - https://doi.org/10.1093/bioinformatics/btu269 DO - 10.1093/bioinformatics/btu269 ID - Natarajan2014 ER - TY - STD TI - Jain P, Dhillon IS. Provable inductive matrix completion. 2013. arXiv preprint arXiv:1306.0626. ID - ref16 ER - TY - CHAP AU - Xu, M. AU - Jin, R. AU - Zhou, Z. -. H. PY - 2013 DA - 2013// TI - Speedup matrix completion with side information: Application to multi-label learning BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Xu2013 ER - TY - CHAP AU - Chiang, K. -. Y. AU - Hsieh, C. -. J. AU - Dhillon, I. S. PY - 2015 DA - 2015// TI - Matrix completion with noisy side information BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Chiang2015 ER - TY - JOUR AU - Liu, G. AU - Li, P. PY - 2016 DA - 2016// TI - Low-rank matrix completion in the presence of high coherence JO - IEEE Trans Sig Process VL - 64 UR - https://doi.org/10.1109/TSP.2016.2586753 DO - 10.1109/TSP.2016.2586753 ID - Liu2016 ER - TY - CHAP AU - Lu, J. AU - Liang, G. AU - Sun, J. AU - Bi, J. PY - 2016 DA - 2016// TI - A sparse interactive model for matrix completion with side information BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Lu2016 ER - TY - JOUR AU - Gelernter, J. AU - Kranzler, H. R. AU - Sherva, R. AU - Koesterer, R. AU - Almasy, L. AU - Zhao, H. AU - Farrer, L. PY - 2014 DA - 2014// TI - Genome-wide association study of opioid dependence: multiple associations mapped to calcium and potassium pathways JO - Biol Psychiatry VL - 76 UR - https://doi.org/10.1016/j.biopsych.2013.08.034 DO - 10.1016/j.biopsych.2013.08.034 ID - Gelernter2014 ER - TY - JOUR AU - Pierucci-Lagha, A. AU - Gelernter, J. AU - Feinn, R. AU - Cubells, J. F. AU - Pearson, D. AU - Pollastri, A. AU - Farrer, L. AU - Kranzler, H. R. PY - 2005 DA - 2005// TI - Diagnostic reliability of the semi-structured assessment for drug dependence and alcoholism (SSADDA) JO - Drug Alcohol Depend VL - 80 UR - https://doi.org/10.1016/j.drugalcdep.2005.04.005 DO - 10.1016/j.drugalcdep.2005.04.005 ID - Pierucci-Lagha2005 ER - TY - JOUR AU - Pierucci-Lagha, A. AU - Gelernter, J. AU - Chan, G. AU - Arias, A. AU - Cubells, J. F. AU - Farrer, L. AU - Kranzler, H. R. PY - 2007 DA - 2007// TI - Reliability of DSM-IV diagnostic criteria using the semi-structured assessment for drug dependence and alcoholism (SSADDA) JO - Drug Alcohol Depend VL - 91 UR - https://doi.org/10.1016/j.drugalcdep.2007.04.014 DO - 10.1016/j.drugalcdep.2007.04.014 ID - Pierucci-Lagha2007 ER - TY - BOOK PY - 2000 DA - 2000// TI - Diagnostic and Statistical Manual of Mental Disorders, Fourth Edition, Text Revision PB - American Psychiatric Association CY - Washington, DC UR - https://doi.org/10.1176/appi.books.9780890423349 DO - 10.1176/appi.books.9780890423349 ID - ref24 ER - TY - JOUR AU - Howie, B. N. AU - Donnelly, P. AU - Marchini, J. PY - 2009 DA - 2009// TI - A flexible and accurate genotype imputation method for the next generation of genome-wide association studies JO - PLoS Genet VL - 5 UR - https://doi.org/10.1371/journal.pgen.1000529 DO - 10.1371/journal.pgen.1000529 ID - Howie2009 ER - TY - JOUR AU - Speed, D. AU - Cai, N. AU - Johnson, M. R. AU - Nejentsev, S. AU - Balding, D. J. AU - Consortium, U. PY - 2017 DA - 2017// TI - Re-evaluation of SNP heritability in complex human traits JO - Nat Genet VL - 49 UR - https://doi.org/10.1038/ng.3865 DO - 10.1038/ng.3865 ID - Speed2017 ER - TY - JOUR AU - Purcell, S. AU - Neale, B. AU - Todd-Brown, K. AU - Thomas, L. AU - Ferreira, M. A. R. AU - Bender, D. AU - Maller, J. AU - Sklar, P. AU - de Bakker, P. I. W. AU - Daly, M. J. AU - Sham, P. C. PY - 2007 DA - 2007// TI - PLINK: A tool set for whole-genome association and population-based linkage analyses JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/519795 DO - 10.1086/519795 ID - Purcell2007 ER - TY - JOUR AU - Zhou, X. AU - Stephens, M. PY - 2012 DA - 2012// TI - Genome-wide efficient mixed-model analysis for association studies JO - Nat Genet VL - 44 UR - https://doi.org/10.1038/ng.2310 DO - 10.1038/ng.2310 ID - Zhou2012 ER - TY - JOUR AU - Willer, C. J. AU - Li, Y. AU - Abecasis, G. R. PY - 2010 DA - 2010// TI - METAL: Fast and efficient meta-analysis of genomewide association scans JO - Bioinformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btq340 DO - 10.1093/bioinformatics/btq340 ID - Willer2010 ER - TY - CHAP AU - Ouyang, H. AU - He, N. AU - Tran, L. AU - Gray, A. PY - 2013 DA - 2013// TI - Stochastic alternating direction method of multipliers BT - International Conference on Machine Learning PB - Microtome Publishing CY - Brookline ID - Ouyang2013 ER - TY - CHAP AU - Zhong, W. AU - Kwok, J. PY - 2014 DA - 2014// TI - Fast stochastic alternating direction method of multipliers BT - International Conference on Machine Learning PB - Microtome Publishing CY - Brookline ID - Zhong2014 ER - TY - CHAP AU - Azadi, S. AU - Sra, S. PY - 2014 DA - 2014// TI - Towards an optimal stochastic alternating direction method of multipliers BT - International Conference on Machine Learning PB - Microtome Publishing CY - Brookline ID - Azadi2014 ER - TY - CHAP AU - Fang, C. AU - Cheng, F. AU - Lin, Z. PY - 2017 DA - 2017// TI - Faster and non-ergodic O(1/k) stochastic alternating direction method of multipliers BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Fang2017 ER - TY - JOUR AU - Yang, J. AU - Yuan, X. -. M. PY - 2013 DA - 2013// TI - Linearized augmented lagrangian and alternating direction methods for nuclear norm minimization JO - Math Comput VL - 82 UR - https://doi.org/10.1090/S0025-5718-2012-02598-1 DO - 10.1090/S0025-5718-2012-02598-1 ID - Yang2013 ER - TY - JOUR AU - Beck, A. AU - Teboulle, M. PY - 2009 DA - 2009// TI - A fast iterative shrinkage-thresholding algorithm for linear inverse problems JO - SIAM J Imaging Sci VL - 2 UR - https://doi.org/10.1137/080716542 DO - 10.1137/080716542 ID - Beck2009 ER - TY - CHAP AU - Moulines, E. AU - Bach, F. R. PY - 2011 DA - 2011// TI - Non-asymptotic analysis of stochastic approximation algorithms for machine learning BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Moulines2011 ER - TY - JOUR AU - Nemirovski, A. AU - Juditsky, A. AU - Lan, G. AU - Shapiro, A. PY - 2009 DA - 2009// TI - Robust stochastic approximation approach to stochastic programming JO - SIAM J Optim VL - 19 UR - https://doi.org/10.1137/070704277 DO - 10.1137/070704277 ID - Nemirovski2009 ER - TY - CHAP AU - Mahdavi, M. AU - Yang, T. AU - Jin, R. PY - 2013 DA - 2013// TI - Stochastic convex optimization with multiple objectives BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Mahdavi2013 ER - TY - CHAP AU - Yu, H. AU - Neely, M. AU - Wei, X. PY - 2017 DA - 2017// TI - Online convex optimization with stochastic constraints BT - Advances in Neural Information Processing Systems PB - Neural Information Processing Systems Foundation, Inc. CY - San Diego ID - Yu2017 ER - TY - CHAP AU - Lu, J. AU - Sun, J. AU - Wang, X. AU - Kranzler, H. R. AU - Gelernter, J. AU - Bi, J. PY - 2017 DA - 2017// TI - Collaborative phenotype inference from comorbid substance use disorders and genotypes BT - Bioinformatics and Biomedicine (BIBM), 2017 IEEE International Conference On PB - IEEE CY - Piscataway ID - Lu2017 ER -