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Table 1 Details of training dataset, validation dataset and independent testing dataset

From: Large-scale prediction of protein ubiquitination sites using a multimodal deep architecture

Data set Description
Number of sequences Number of positive data Number of negative data Note
Training 12,100 7733 250,054 Random partitioning in each training iteration
Validation 1547 50,010
Testing 1345 6293 46,080 Reservation