Table 2 The selected physico-chemical properties
From: Large-scale prediction of protein ubiquitination sites using a multimodal deep architecture
Physico-chemical property | Description |
|---|---|
EISD860102 | Atom-based hydrophobic moment |
ZIMJ680104 | Isoelectric point |
HUTJ700103 | Entropy of formation |
KARP850103 | Flexibility parameter for two rigid neighbors |
JANJ780101 | Average accessible surface area |
FAUJ880111 | Positive charge |
GUYH850104 | Apparent partition energies calculated from Janin index |
JANJ780103 | Percentage of exposed residues |
JANJ790102 | Transfer free energy |
PONP800102 | Average gain in surrounding hydrophobicity |
CORJ870101 | NNEIG index |
VINM940101 | Normalized flexibility parameters, average |
OOBM770101 | Average non-bonded energy per atom |