Table 1 Differentially expressed circRNAs in2d.nscversus 0d.nsc
From: Circular RNA expression profiles during the differentiation of mouse neural stem cells
Chromosome | Start junction (bp) | End junction (bp) | Strand | Cognate gene symbol |
|---|---|---|---|---|
12 upregulated circRNAs in 2d.nscversus 0d.nsc | ||||
16 | 85,013,626 | 85,043,743 | – | App |
17 | 90,560,740 | 90,597,629 | – | Nrxn1 |
19 | 28,665,752 | 28,666,236 | – | Glis3 |
17 | 25,235,181 | 25,235,627 | – | Gnptg |
5 | 81,688,508 | 81,771,680 | + | Adgrl3 |
2 | 68,358,813 | 68,410,141 | – | Stk39 |
16 | 58,424,560 | 58,433,463 | + | Dcbld2 |
2 | 33,260,477 | 33,324,703 | – | Ralgps1 |
2 | 32,182,457 | 32,194,996 | + | Prrc2b |
1 | 25,221,759 | 25,228,547 | – | Adgrb3 |
4 | 84,291,692 | 84,293,662 | – | Bnc2 |
2 | 68,390,913 | 68,410,141 | – | Stk39 |
16 downregulated circRNAs in 2d.nscversus 0d.nsc | ||||
12 | 52,516,076 | 52,542,636 | + | Arhgap5 |
2 | 166,834,470 | 166,836,457 | + | Arfgef2 |
1 | 185,386,245 | 185,397,267 | + | Eprs |
7 | 46,590,606 | 46,635,556 | – | Sergef |
16 | 13,697,332 | 13,699,075 | + | Bfar |
6 | 134,541,651 | 134,542,045 | – | Lrp6 |
12 | 53,139,380 | 53,142,768 | + | Akap6 |
2 | 118,631,758 | 118,635,277 | + | Bub1b |
13 | 91,524,584 | 91,564,694 | + | Ssbp2 |
X | 69,544,408 | 69,545,269 | + | Aff2 |
14 | 47,016,276 | 47,016,795 | + | Samd4 |
16 | 17,015,897 | 17,018,475 | + | Mapk1 |
X | 120,399,401 | 120,401,897 | + | Pcdh11x |
16 | 30,543,401 | 30,547,469 | – | Tmem44 |
9 | 22,024,673 | 22,036,860 | – | Elavl3 |
7 | 18,942,215 | 18,950,619 | + | Nova2 |