Table 4 Gene Ontology terms associated with top 100 hub genes of the early embryonic development-modulated differential network
From: scdNet: a computational tool for single-cell differential network analysis
Category | Term | Gene count | P-value |
|---|---|---|---|
Annotation Cluster 1 (Enrichment Score: 2.47) | |||
CC | GO:0043228~non-membrane-bounded organelle | 14 | 4.9 × 10−4 |
CC | GO:0043232~intracellular non-membrane-bounded organelle | 14 | 4.9 × 10−4 |
CC | GO:0005856~cytoskeleton | 6 | 0.15 |
Annotation Cluster 2 (Enrichment Score: 1.62) | |||
MF | GO:0030554~adenyl nucleotide binding | 10 | 1.6 × 10−2 |
MF | GO:0001883~purine nucleoside binding | 10 | 1.6 × 10−2 |
MF | GO:0001882~nucleoside binding | 10 | 1.7 × 10−2 |
Annotation Cluster 3 (Enrichment Score: 1.40) | |||
CC | GO:0005840~ribosome | 4 | 1.3 × 10−2 |
BP | GO:0006412~translation | 5 | 1.3 × 10−2 |
CC | GO:0030529~ribonucleoprotein complex | 5 | 2.9 × 10−2 |
Annotation Cluster 4 (Enrichment Score: 0.79) | |||
BP | GO:0006333~chromatin assembly or disassembly | 3 | 3.9 × 10−2 |
CC | GO:0000785~chromatin | 3 | 6.6 × 10−2 |
CC | GO:0044427~chromosomal part | 3 | 0.20 |
Annotation Cluster 5 (Enrichment Score: 0.64) | |||
CC | GO:0044429~mitochondrial part | 4 | 0.15 |
CC | GO:0031967~organelle envelope | 4 | 0.16 |
CC | GO:0031975~envelope | 4 | 0.16 |