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Table 3 The AUC on MSigDB C4 v6.0 and breast cancer subtype gene expression data

From: Optimizing gene set annotations combining GO structure and gene expression data

AUC HER2-enriched subtype Luminal A subtype Luminal B subtype Normal-like subtype
The proposed method 0.570 0.617 0.646. 0.563
The EMVC algorithm 0.540 0.614 0.635 0.562