Table 3 The AUC on MSigDB C4 v6.0 and breast cancer subtype gene expression data
From: Optimizing gene set annotations combining GO structure and gene expression data
AUC | HER2-enriched subtype | Luminal A subtype | Luminal B subtype | Normal-like subtype |
|---|---|---|---|---|
The proposed method | 0.570 | 0.617 | 0.646. | 0.563 |
The EMVC algorithm | 0.540 | 0.614 | 0.635 | 0.562 |