Skip to main content

Table 4 Prediction comparison of different methods on BID test sets

From: Hot spot prediction in protein-protein interactions by an ensemble system

Method

Features

ACC

F1

PRE

Hot point

Structural features

0.72

0.49

0.55

ppRF

B-factor, individual atomic contacts and the co-occurring contacts

0.78

0.58

0.69

HEP

Physicochemical, structural neighborhood features

0.79

0.70

0.60

PredHS

Structural neighborhood features

0.88

0.76

0.79

Hu method

Sequence features

0.76

0.80

1.0

Our method

Sequence features

0.92

0.89

0.95