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Table 1 Comparison of runtime (in seconds) of FlowGrid against other clustering algorithms

From: Ultrafast clustering of single-cell flow cytometry data using FlowGrid

Data set

Samples

Markers

Cells

Time in second (\(\bar {x}\pm sd\))

    

FlowGrid

FlowSOM

FlowPeaks

Flock

Multi-center

16

8

29-77 ×103

0.23 ± 0.09

4.01 ± 1.08

2.27 ± 0.61

10.3 ± 3.45

Flow-CAP-GvHD

12

4

12-33 ×103

0.07 ± 0.04

2.16 ± 0.54

0.28 ± 0.16

0.58 ± 0.28

Flow-CAP-DLBL

30

3

2-25 ×103

0.04 ± 0.01

1.25 ± 0.32

0.10 ± 0.09

0.22 ± 0.16

Flow-CAP-HSCT

30

4

6-9 ×103

0.04 ± 0.02

1.35 ± 0.28

0.11 ± 0.02

0.28 ± 0.06

Seaflow0

-

4

23.6 ×106

11.51

572.65

NA

6628.30

Seaflow1

-

4

12.7 ×106

3.09

312.95

258.13

NA

Seaflow11

-

4

22.7 ×106

6.37

544.79

NA

NA

  1. NA represents that the algorithm got error in the data set