A search engine to identify pathway genes from expression data on multiple organisms

BMC Systems Biology

Table 4 The number of genes and pathways available for use with the MSGR search engine for the six organisms and five ancestral combinations.

	Genes w/Ortho^a	Genes with Data and Ortho^b	Genes with Data^c	Pathways^d
H.sap	17366^e	17366	22080	539
D.mel	5834	5697	13403	492
C.ele	5070	4174	21925	490
S.cer	2470	2451	6630	428
A.thal	4346	1893	9169	405
H.pyl	325	324	1590	105
Ecdy	-	-	3024	235
Anim	-	-	6847	406
Opis	-	-	2451	199
Euk	-	-	1893	130
Cell	-	-	324	33

^aNumber of genes with BTPs to a human gene.
^bNumber of genes that have BTPs and have expression data.
^cTotal number of genes with available expression data.
^dTotal number of pathways with at least five genes.
^eNumber of human genes with protein sequences available for constructing the BTP table.

ISSN: 1752-0509