Table 4 Nestedness (N) quantification for the genome scale network and for the sub-networks of differentially expressed genes during the lag phase of old and young cells
| Â | Genomic network | Young cells network | Old cells network | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Sigma factors | TFs | KEGG paths | TIGR functions | Sigma factors | TFs | KEGG paths | TIGR functions | TFs | KEGG paths | TIGR functions |
N | 0.897 | 0.985 | 0.911 | 0.884 | 0.495 | 0.829 | 0.609 | 0.803 | 0.490 | 0.574 | 0.665 |
Nr 1 | 0.588 | 0.942 | 0.908 | 0.967 | 0.779 | 0.862 | 0.657 | 0.911 | 0.776 | 0.827 | 0.830 |
Ratio (N/Nr)2 | 1.526 | 1.046 | 1.003 | 0.914 | 0.635 | 0.963 | 0.927 | 0.881 | 0.632 | 0.694 | 0.801 |
p value3 | < 0.0001 | < 0.0001 | 0.122 | 1.000 | 1.000 | 0.911 | 0.889 | 1.000 | 0.992 | 1.000 | 1.000 |