Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation

BMC Systems Biology

Table 1 Enriched GO categories of down-regulated divergent genes.

GO Terms and Description	Total Genes	Changed Genes	-log₁₀(p)	FDR
(Biological Process)
GO:0007049 Cell cycle	597	14	5.7044	0
GO:0051301 Cell division	187	7	4.2512	0.005
GO:0022402 Cell cycle process	334	9	4.22	0.003
GO:0045739 Positive regulation of DNA repair	5	2	3.5589	0.03
GO:0051726 Regulation of cell cycle	248	7	3.4893	0.026
GO:0000082 G1 S transition of mitotic cell cycle	30	3	3.2793	0.032
GO:0009132 Nucleoside diphosphate metabolic process	7	2	3.2397	0.036
GO:0051329 Interphase of mitotic cell cycle	76	4	3.1561	0.035
GO:0006259 DNA metabolic process	373	8	3.1266	0.031
GO:0006282 Regulation of DNA repair	8	2	3.1162	0.039
GO:0051325 Interphase	79	4	3.0926	0.036
GO:0006396 RNA processing	298	7	3.0138	0.038
GO:0009262 Deoxyribonucleotide metabolic process	9	2	3.0086	0.042
GO:0007059 Chromosome segregation	38	3	2.9748	0.04

This table contains the enriched GO categories of the down-regulated divergent genes. The first column includes the GO terms and description. The second column contains the total number of genes for that given category on the Agilent microarray. The third column shows the number of down-regulated divergent genes for that category. The fourth column lists the -log₁₀ probability associated with that categories. The fifth column contains the false discovery rate.

ISSN: 1752-0509