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Table 1 Summary of results from the model evaluation.

From: Reconstruction and logical modeling of glucose repression signaling pathways in Saccharomyces cerevisiae

Knockout Genotype

Number of Genes Evaluated

Number of true predictions

Percentage of true predictions for genes changed on array

Percentage of true predictions for genes changed in the model

Percentage of true predictions

Δrgt1

34 (25)

28 (21)

83% (83%)

71% (63%)

82% (84%)

Δmig1

38 (27)

24 (20)

29% (44%)

40% (57%)

63% (74%)

Δmig1Δmig2

38 (28)

24 (19)

47% (53%)

69% (80%)

63% (68%)

Δsnf1Δsnf4

34 (25)

17 (14)

45% (60%)

56% (64%)

50% (56%)

Δgrr1

38 (28)

15 (10)

25% (24%)

55% (100%)

39% (43%)

  1. In parentheses are the numbers when dubious genes are not included in the computations (see Discussion for details).