iRsp1095: A genome-scale reconstruction of the Rhodobacter sphaeroides metabolic network

BMC Systems Biology

Table 4 Growth phenotypes predicted by the model under a variety of routinely utilized laboratory conditions*

* +/+ Growth and H₂ production predicted; +/- Growth but no H₂ production predicted; -/- No growth
^aOxygen (O₂) or DMSO was used as the sole electron acceptors in simulations.
^b Succinate and lactate uptake rates were set to 3 mmol/g DW h, while the NH₃ and glutamate uptake rates were set to 1 mmol/g DW h, as these are within the rate of experimentally observed uptake rates for these substrates. CO₂, H₂ and N₂ uptake rates were set to 1 mmol/g DW h for photoautotrophic growth simulations.

ISSN: 1752-0509