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Table 4 GO biological process terms of modules with top 10 highest detection parameters

From: How yeast re-programmes its transcriptional profile in response to different nutrient impulses

GO terms

dp

P module

 

ribosome biogenesis

0.0650

Transcription

0.0231

regulation of transcription, DNA-dependent

0.0172

Transport

0.0135

rRNA metabolic process

0.0135

regulation of translation

0.0125

Translation

0.0110

rRNA processing

0.0077

Cell cycle

0.0038

M module

 

transport

0.0292

protein transport

0.0086

cellular response to heat

0.0079

oxidation reduction

0.0048

regulation of transcription, DNA-dependent

0.0032

ubiquitin-dependent protein catabolic process

0.0031

Transcription

0.0029

Translation

0.0026

S module

 

Translation

0.1253

Transport

0.0745

regulation of translation

0.0369

regulation of transcription, DNA-dependent

0.0331

Transcription

0.0262

protein transport

0.0199

Cell cycle

0.0172

DNA repair

0.0146

Glycolysis

0.0123

chromatin modification

0.0102

D module

 

Transport

0.0548

regulation of transcription, DNA-dependent

0.0259

protein transport

0.0182

Transcription

0.0169

ubiquitin-dependent protein catabolic process

0.0102

protein amino acid phosphorylation

0.0098

regulation of translation

0.0094

vesicle-mediated transport

0.0083

Translation

0.0055