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Table 1 Unused reactions in the E.coli TRN (Type I - Regulatory rules missing).

From: Comparison on extreme pathways reveals nature of different biological processes

Reactions

Reuglatory rules

Reaction type

NOT_BirA

--

internal

b0774_1

NOT(BirA)

internal

b0775_1

NOT(BirA)

internal

b0776_1

NOT(BirA)

internal

b0778_1

NOT(BirA)

internal

Ex_b0774

--

exchange

Ex_b0775

--

exchange

Ex_b0776

--

exchange

Ex_b0778

--

exchange

  1. NOT_BirA represents the regulatory reaction that leads to the inhibition of gene transcription generating BirA. '-' in the second column represents the deficiency of corresponding regulatory rules in the model.