From: Predicting protein complex in protein interaction network - a supervised learning based method
Dataset | Method | Num | P | R | F | Sn | PPV | Acc |
---|---|---|---|---|---|---|---|---|
DIP | MCODE | 79 | 0.5570 | 0.1332 | 0.2150 | 0.2758 | 0.6880 | 0.4356 |
 | COACH | 747 | 0.4351 | 0.5195 | 0.4735 | 0.4779 | 0.6921 | 0.5751 |
 | CMC | 262 | 0.5687 | 0.4102 | 0.4766 | 0.4791 | 0.7241 | 0.5890 |
 | ClusterONE | 354 | 0.5113 | 0.4072 | 0.4533 | 0.3903 | 0.7124 | 0.5273 |
 | Ours | 613 | 0.6232 | 0.5269 | 0.5710 | 0.4764 | 0.7375 | 0.5927 |
Gavin | MCODE | 78 | 0.8718 | 0.2809 | 0.4249 | 0.4174 | 0.7017 | 0.5412 |
 | COACH | 326 | 0.7393 | 0.6086 | 0.6676 | 0.6277 | 0.7162 | 0.6705 |
 | CMC | 202 | 0.7228 | 0.4176 | 0.5294 | 0.3817 | 0.7067 | 0.5194 |
 | ClusterONE | 200 | 0.8050 | 0.5693 | 0.6669 | 0.6211 | 0.7048 | 0.6617 |
 | Ours | 275 | 0.8145 | 0.5730 | 0.6728 | 0.5083 | 0.7526 | 0.6185 |
Krogan | MCODE | 63 | 0.6349 | 0.1544 | 0.2484 | 0.4439 | 0.4865 | 0.4642 |
 | COACH | 570 | 0.4439 | 0.4865 | 0.4642 | 0.502 | 0.6575 | 0.5745 |
 | CMC | 242 | 0.5909 | 0.3555 | 0.4439 | 0.3263 | 0.7215 | 0.4852 |
 | ClusterONE | 258 | 0.5349 | 0.4381 | 0.4817 | 0.4865 | 0.7567 | 0.6067 |
 | Ours | 465 | 0.5591 | 0.4955 | 0.5254 | 0.4944 | 0.7189 | 0.5962 |
Collins | MCODE | 111 | 0.8468 | 0.431 | 0.5713 | 0.5438 | 0.7600 | 0.6429 |
 | COACH | 251 | 0.6972 | 0.5651 | 0.6243 | 0.6275 | 0.7931 | 0.7054 |
 | CMC | 172 | 0.6919 | 0.4234 | 0.5253 | 0.4882 | 0.7336 | 0.5985 |
 | ClusterONE | 180 | 0.8222 | 0.5958 | 0.6909 | 0.6526 | 0.7275 | 0.6891 |
 | Ours | 150 | 0.8133 | 0.5096 | 0.6266 | 0.6338 | 0.7431 | 0.6863 |