Table 2 Differentially expressed miRNA families in soybean primary root tips exposed to water deficit
From: Small RNA profiles in soybean primary root tips under water deficit
miRNA_family | Control-1 (RPTM) | Control-2 (RPTM) | Ws-1 (RPTM) | Ws-2 (RPTM) | logFC | logCPM | PValue | FDR |
|---|---|---|---|---|---|---|---|---|
MIR5037 | 70 | 57 | 0 | 0 | −9.0 | 4.1 | 4.58E-14 | 1.12E-12 |
MIR2119 | 4192 | 4134 | 157 | 133 | −4.9 | 10.1 | 1.05E-72 | 9.02E-71 |
MIR5559 | 562 | 434 | 27 | 30 | −4.1 | 7.1 | 1.09E-45 | 6.21E-44 |
MIR4408 | 45 | 38 | 7 | 5 | −2.8 | 3.7 | 2.11E-04 | 2.12E-03 |
MIR1536 | 60 | 75 | 14 | 15 | −2.2 | 4.4 | 2.49E-05 | 2.84E-04 |
MIR403 | 104 | 108 | 34 | 30 | −1.7 | 5.2 | 1.89E-07 | 2.70E-06 |
MIR171 | 3938 | 3884 | 1138 | 1335 | −1.7 | 10.3 | 4.35E-13 | 9.30E-12 |
MIR398 | 50 | 57 | 20 | 15 | −1.6 | 4.2 | 2.21E-03 | 1.40E-02 |
MIR530 | 403 | 434 | 184 | 163 | −1.3 | 7.2 | 2.34E-10 | 3.64E-09 |
MIR5370 | 94 | 99 | 34 | 49 | −1.2 | 5.2 | 4.08E-04 | 3.49E-03 |
MIR4397-3 | 139 | 104 | 41 | 74 | −1.1 | 5.5 | 1.68E-03 | 1.15E-02 |
MIR4391 | 462 | 443 | 259 | 177 | −1.1 | 7.4 | 2.93E-06 | 3.58E-05 |
MIR3522 | 10,815 | 10,535 | 24,937 | 26,151 | 1.2 | 13.2 | 2.33E-07 | 3.06E-06 |
MIR408 | 219 | 264 | 504 | 719 | 1.3 | 7.8 | 5.70E-12 | 1.08E-10 |
MIR4344 | 15 | 19 | 55 | 44 | 1.5 | 4.1 | 5.10E-03 | 3.01E-02 |
MIR1535 | 30 | 14 | 68 | 79 | 1.7 | 4.6 | 1.55E-04 | 1.66E-03 |
MIR4411 | 25 | 14 | 82 | 49 | 1.7 | 4.5 | 1.34E-03 | 1.01E-02 |
MIR167 | 1357 | 1574 | 5426 | 5396 | 1.9 | 10.8 | 6.66E-16 | 1.90E-14 |
MIR4385 | 10 | 14 | 48 | 44 | 1.9 | 4.0 | 2.02E-03 | 1.33E-02 |
MIR397 | 254 | 174 | 961 | 917 | 2.1 | 8.2 | 3.29E-30 | 1.41E-28 |
MIR2111 | 104 | 80 | 382 | 488 | 2.2 | 7.1 | 8.18E-18 | 2.80E-16 |
MIR1512 | 209 | 207 | 1459 | 1281 | 2.7 | 8.6 | 1.57E-79 | 2.68E-77 |
MIR4403 | 0 | 0 | 14 | 30 | 7.5 | 2.7 | 3.69E-04 | 3.32E-03 |