From: GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
NN classifiera | Input Type | Encoder Layer 1d | Encoder Layer 2 | Encoder Layer 3 | Encoder Layer 4 | Accuracy of 10-fold cross validation |
---|---|---|---|---|---|---|
Superset | Genesb | 2334 | 200 | Â | Â | 88.79% |
Gene set | Genes | 2334 | Â | Â | Â | 87.69% |
2-layer fc | Genes | 2334 | 200 | Â | Â | 47.86% |
2-layer fc | Genes | 2000 | 500 | Â | Â | 37.98% |
4-layer fc | Genes | 2000 | 200 | 100 | 50 | 46.06% |
2-layer fc | PCc | 400 | 100 | Â | Â | 87.57% |
4-layer fc | PC | 200 | 200 | 100 | 25 | 87.57% |