Table 1 SNAVI native file storage format SIG file
From: SNAVI: Desktop application for analysis and visualization of large-scale signaling networks
Columns are separated by one white space and contain the following information: | |
|---|---|
Field | Description |
Source Name | Cellular component that is affecting a target component |
Source Human Accession | Swiss-Prot accession code or other code if available |
Source Mouse Accession | Swiss-Prot accession code or other code if available |
Source Type | The type of molecule of this component |
Source Location | Cellular localization of the component |
Target Name | Cellular component that is affected by the source component |
Target Human Accession | Swiss-Prot accession code or other code if available |
Target Mouse Accession | Swiss-Prot accession code or other code if available |
Target Type | The type of molecule of this component |
Target Location | Cellular localization of the component |
Effect | activation (+), inhibition (_), or neutral (0) |
Type of Interaction | type of chemical interaction linking the two components |
PubMed IDs | PubMed database accession number |