Table 7 List of genes appearing in the four GO-Enriched clusters analyzed using Genevestigator
From: Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network
Cluster | Gene ID | Gene name | Description |
|---|---|---|---|
1 | AT2G43530 | Encodes a defensin-like (DEFL) family protein. | |
defense response | AT4G23600 | CORI3 | Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding |
AT5G02940 | similar to phosphotransferase-related [Arabidopsis thaliana] | ||
AT1G53310 | ATPPC1 | Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins | |
AT5G42650 | AOS | Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. | |
AT1G19670 | CORI1 | Chlorophyllase is the first enzyme involved in chlorophyll degradation. | |
AT3G45140 | LOX2 | Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis. Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection. | |
AT2G43550 | Encodes a defensin-like (DEFL) family protein. | ||
2 | AT5G06640 | proline-rich extensin-like family protein | |
structural constituent of cell wall | AT3G54590 | AthRGP1 | Encodes a hydroxyproline-rich glycoprotein |
AT4G08410 | proline-rich extensin-like family protein | ||
AT2G24980 | proline-rich extensin-like family protein; Identical to Extensin-2 precursor (EXT2) | ||
3 | AT1G29440 | auxin-responsive family protein | |
response to auxin stimulus | AT1G29500 | auxin-responsive protein, putative | |
AT1G29510 | SAUR68 | SAUR68 (SMALL AUXIN UPREGULATED 68) | |
AT1G29460 | auxin-responsive protein, putative | ||
4 | AT5G65360 | histone H3; Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] | |
nucleosome assembly | AT1G09200 | histone H3; Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] | |
AT5G10390 | histone H3; Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] | ||
AT5G59870 | HTA6 | Encodes HTA6, a histone H2A protein. |