Table 8 Precision and recall values of maximal k-connected (k ≥ 1) subgraphs, C 1, C 2, ..., C 9, and their union U.
From: Protein complex prediction based on k-connected subgraphs in protein interaction network
| Â | PPI BioGRID | PPI Gavin 6 | PPI Gavin 2 | PPI Krogan | PPI Ho | |||||
|---|---|---|---|---|---|---|---|---|---|---|
Data | Prec/Recall | Prec/Recall | Prec/Recall | Prec/Recall | Prec/Recall | |||||
C 1 | 0.356 | 0.163 | 0.486 | 0.248 | 0.685 | 0.252 | 0.537 | 0.184 | 0.423 | 0.112 |
C 2 | 0.380 | 0.149 | 0.497 | 0.241 | 0.535 | 0.161 | 0.462 | 0.184 | 0.461 | 0.058 |
C 3 | 0.516 | 0.150 | 0.597 | 0.187 | 0.523 | 0.102 | 0.549 | 0.150 | 0.555 | 0.023 |
C 4 | 0.631 | 0.112 | 0.666 | 0.37 | 0.520 | 0.045 | 0.709 | 0.090 | 0.000 | 0.000 |
C 5 | 0.615 | 0.094 | 0.666 | 0.070 | 0.538 | 0.022 | 0.720 | 0.065 | -- | -- |
C 6 | 0.614 | 0.059 | 0.562 | 0.049 | 0.600 | 0.013 | 0.645 | 0.045 | -- | -- |
C 7 | 0.561 | 0.043 | 0.800 | 0.024 | 0.500 | 0.002 | 0.608 | 0.037 | -- | -- |
C 8 | 0.680 | 0.0353 | 0.714 | 0.018 | 1.000 | 0.002 | 0.666 | 0.033 | -- | -- |
C 9 | 0.880 | 0.0276 | 0.000 | 0.000 | -- | -- | -- | -- | -- | -- |
U | 0.435 | 0.182 | 0.543 | 0.275 | 0.595 | 0.271 | 0.533 | 0.195 | 0.416 | 0.114 |