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Table 1 Top GO Biological Processes shared by the genes in the 7 modules shown in Figure 12, at p < 0.01.

From: Global analysis of phase locking in gene expression during cell cycle: the potential in network modeling

GO Accession #

Description

Module

GO:0006412

translation

Red

GO:0044249

cellular biosynthetic process

Red

GO:0009059

macromolecule biosynthetic process

Red

GO:0042254

ribosome biogenesis

Green

GO:0022613

ribonucleoprotein complex biogenesis

Green

GO:0006412

translation

Brown

GO:0009059

macromolecule biosynthetic process

Brown

GO:0044249

cellular biosynthetic process

Brown

GO:0044267

cellular protein metabolic process

Brown

GO:0019538

protein metabolic process

Brown

GO:0044260

cellular macromolecule metabolic process

Brown

GO:0009058

biosynthetic process

Brown

GO:0010467

gene expression

Brown

GO:0006364

rRNA processing

Yellow

GO:0016072

rRNA metabolic process

Yellow

GO:0042254

ribosome biogenesis

Yellow

GO:0006396

RNA processing

Yellow

GO:0022613

ribonucleoprotein complex biogenesis

Yellow

GO:0016070

RNA metabolic process

Yellow

GO:0010467

gene expression

Yellow

GO:0006139

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

Yellow

GO:0022613

ribonucleoprotein complex biogenesis

Turquoise

GO:0042254

ribosome biogenesis

Turquoise

GO:0000278

mitotic cell cycle

Turquoise

GO:0022402

cell cycle process

Turquoise

GO:0007049

cell cycle

Turquoise

GO:0006412

translation

Turquoise

GO:0044249

cellular biosynthetic process

Turquoise

GO:0006396

RNA processing

Turquoise

GO:0022403

cell cycle phase

Turquoise

GO:0006364

rRNA processing

Turquoise

GO:0000074

regulation of cell cycle

Turquoise

GO:0006261

DNA-dependent DNA replication

Turquoise

GO:0006260

DNA replication

Turquoise

GO:0016072

rRNA metabolic process

Turquoise