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Table 3 Top ranking potentially DosR-regulated genes.

From: An integrated machine learning approach for predicting DosR-regulated genes in Mycobacterium tuberculosis

Rv acc. description gene name
Rv0079** hypothetical protein  
Rv0311* possible remnant of A transposase  
Rv0482* UDP-N-acetylenolpyruvoylglucosamine reductase murB
Rv0569** hypothetical protein  
Rv0571c** hypothetical protein  
Rv0574c** poly-gamma-glutamate synthesis protein  
Rv0654* putative dioxygenase  
Rv0835* possible lipoprotein LpqQ ipqQ
Rv0946c* glucose-6-phosphate isomerase pgi
Rv1371* probable conserved membrane protein  
Rv1733c** probable conserved transmembrane protein  
Rv1737c** MFS transporter, NNP family, nitrate transporter nark2
Rv1738** hypothetical protein  
Rv1813c** hypothetical protein  
Rv1954c* hypothetical protein  
Rv1997** cation-transporting ATPase ctpF
Rv1998c* hypothetical protein  
Rv2005c** hypothetical protein  
Rv2006** putative trehalose/maltose hydrolase otsB1
Rv2007c** ferredoxin fdxA
Rv2031c** heat shock protein hspx hspX
Rv2032** Conserved hypothetical protein Acg acg
Rv2623 hypothetical protein TB31.7
Rv2625c probable conserved transmembrane alanine and leucine rich protein  
Rv2626c** hypothetical protein  
Rv2627c** hypothetical protein  
Rv2628** hypothetical protein  
Rv2629 hypothetical protein  
Rv3044* putative iron (III) dicitrate transport system substrate-binding protein fecB
Rv3081* hypothetical protein  
Rv3127** hypothetical protein  
Rv3130c** hypothetical protein  
Rv3131** hypothetical protein  
Rv3134c** hypothetical protein  
  1. The 34 top ranking genes according to the logistic score. Genes with one * are the novel DosR-regulated genes detected in this study, while those with two * are the documented DosR-regulated genes in the training data. Genes with no * were previously reported as indirectly regulated by DosR, but were found to contain DosR-binding-motifs in this study.