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Table 2 Gene deletion strategies for ethanol production in E. coli

From: OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains

Deleted Genes

Growth Rate (hr-1)

Ethanol Yield (%)

none (wild-type)

0.467

39.3

arcA

pgi

   

0.122

83.5

nuoN

pgi

   

0.121

83.6

fnr

gntR

pflB

tdcE

pgi

0.225

86.2

arcA

gntR

pta

eutD

tpiA

0.244

89.3

fnr

gntR

pflB

tdcE

tpiA

0.235

90.5

  1. The predicted ethanol yields and growth rates are listed for two-deletion strategies and five-deletion strategies. Three or four deletion strategies are not shown because the ethanol yield was not significantly improved over two deletion strategies. The variability in ethanol yield at the predicted maximum growth rate was zero or very small (< 0.01%) for all cases. The ethanol yield is reported as % of the maximum theoretical yield (100% is 0.51 g ethanol/g glucose or 2 mol ethanol/mol glucose). Maximum glucose uptake rate of 18.5 mmol/gDW/hr was used to simulate anaerobic growth conditions.