Skip to main content

Advertisement

Table 1 Correlations between metabolites and transcript levels in developing seedlings.

From: Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis

Metabolite Number of Relationships* Direction of Correlations†
Glucose 1 N
Sucrose 129 P
Fructose 1 P
Rhamnose 1 N
Malate 3 N (1), P (2)
Citrate 7 N (6), P (1)
Fumarate 3 N (2), P (1)
Formate 1 N
Lactate 21 N
Glutamine 7 N
Alanine 4 N (1), P (3)
Valine 3 N
Threonine 5 N
Trigonelline 16 N (15), P (1)
Choline 1 N
unkD8.0 6 N (2), P (4)
unkM7.9 4 N
unkS7.36 3 N
unkM5.18 2 N (1), P (1)
unkM1.85 19 N (18), P (1)
  1. *Number of significant Pearson correlations between the metabolite and genes above p = 9.8 × 10-5 (FDR = 5%) determined over the 9 sampling periods, day 0 to day 8. †The direction of the linear regression, either positive (P) or negative (N) and the number in each direction in parentheses.