Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis

Table 1 Genes identified as distinguishing the MPK407 knockout strain from wild-type by T-Test analysis

ORF Name	Replicon	Gene Symbol	Fold Change	Function (listed if known)
VNG0001H	Chromosome	VNG0001H	0.01977
VNG0002G	Chromosome	yvrO	0.02768	ABC transporter, ATP-binding protein
VNG0003C	Chromosome	VNG0003C	0.02390
VNG0035C	Chromosome	VNG0035C	0.0156
VNG0058H	Chromosome	VNG0058H	87.10
VNG0146H	Chromosome	VNG0146H	0.02169
VNG0539C	Chromosome	VNG0539C	0.01066
VNG0617H	Chromosome	VNG0617H	0.0326
VNG0620G	Chromosome	edp	0.01955	Proteinase IV homolog
VNG0810H	Chromosome	VNG0810H	0.02972
VNG0849C	Chromosome	VNG0849C	0.02645
VNG0928G	Chromosome	mak	0.02170	MAPK-activated protein kinase
VNG0934H	Chromosome	VNG0934H	0.03188
VNG0942G	Chromosome	cheW2	0.01911	Chemotaxis protein
VNG0943C	Chromosome	VNG0943C	0.01461
VNG0958G	Chromosome	htr15	0.01418	Htr15 transducer
VNG0974G	Chromosome	cheY	0.03160	Chemotaxis protein
VNG0976G	Chromosome	cheW1	0.01584	Chemotaxis protein
VNG1276C	Chromosome	VNG1276C	34.86
VNG1607G	Chromosome	cheC2	28.79	Chemotaxis protein
VNG2442H	Chromosome	VNG2442H	41.40
VNG6155H	pNRC200	VNG6155H	90.14
VNG6159H	pNRC200	VNG6159H	61.89
VNG6332H	pNRC200	VNG6332H	66.12
VNG6361G	pNRC200	npa	20.8	Neutral proteinase
VNG6368H	pNRC200	VNG6368H	36.26
VNG6379C	pNRC200	VNG6379C	106.4
VNG6385H	pNRC200	VNG6385H	42.94
VNG6413H	pNRC200	VNG6413H	40.25
VNG6420H	pNRC200	VNG6420H	24.48
VNG6441H	pNRC200	VNG6441H	67.71	putative DNA-binding protein

ISSN: 1752-0509