Skip to main content

Table 2 Data sets analyzed for verification and expansion of the cell proliferation literature model

From: Construction of a computable cell proliferation network focused on non-diseased lung cells

Data Set EIF4G1 RhoA CTNNB1 NR3C1
Data Set ID GSE11011 GSE5913 PMID15186480 E-MEXP-861
PubMed ID 18426977 17213802 15186480 17901120
Perturbation EIF4G1 siRNA RhoA Q63L constitutive beta-catenin-LEF-1 glucocorticoid receptor null
Control Samples 3 control 8 control 3 control 3 control
Experimental Samples 3 siRNA 7 transfected 3 transgenic 3 null
Microarray Platform Affymetrix Human Genome U133A 2.0 Affymetrix Mouse Genome U74A v2 Affymetrix Mouse Genome 430A GE Healthcare CodeLink Mouse Whole Genome Bioarray
Tissue MCF10A cells NIH3T3 cells day 18.5 embryonic lung day 18.5 embryonic lung
Species human mouse mouse mouse
# State changes 367 1153 645 144